Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs7815869 chr8:112844394 A/C KRT6C chr12:52862300-52867569:- 0.82 11.69 3.61E-16 Box Plot
ACC rs7816096 chr8:112962435 A/C KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs7816226 chr8:112902314 C/G KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs7819446 chr8:112936275 T/C KRT6C chr12:52862300-52867569:- 0.76 9.02 3.28E-12 Box Plot
ACC rs78218183 chr17:32521864 A/G TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs78267898 chr7:17271087 G/A TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs78270676 chr1:119654830 C/G PRHOXNB chr13:28552243-28562774:- 0.63 9.12 2.25E-12 Box Plot
ACC rs78305903 chr7:17247817 C/T TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs78320058 chr1:80970012 T/C PRHOXNB chr13:28552243-28562774:- 0.63 7.95 1.51E-10 Box Plot
ACC rs7836329 chr8:112752967 C/T KRT6C chr12:52862300-52867569:- 0.71 8.21 5.9E-11 Box Plot
ACC rs7836483 chr8:112753182 A/T KRT6C chr12:52862300-52867569:- 0.71 8.21 5.9E-11 Box Plot
ACC rs7836594 chr8:112753183 C/T KRT6C chr12:52862300-52867569:- 0.71 8.21 5.9E-11 Box Plot
ACC rs7836750 chr8:9823063 A/G PRHOXNB chr13:28552243-28562774:- 0.61 8.02 1.17E-10 Box Plot
ACC rs78398903 chr1:199117349 A/G DHX37 chr12:125431371-125473668:- -0.85 -7.75 3.18E-10 Box Plot
ACC rs78448597 chr11:85681963 G/C GPR128 chr3:100328433-100414323:+ 1.02 8.1 8.75E-11 Box Plot